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… studied what happens to the tree’s physical traits and gene expression when the fungus is present. The Impact Black … PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . By contrast, … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …

… (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … studied from simpler (and smaller) models, Miscanthus has a large and complex genome whose evolutionary history and … was recently published in Nature Communications by an international, multi-institutional team. The work was a joint …

… understanding which microbes are present in a sample, to generate data about which organisms are active, and which … or wouldn't,” said Rex Malmstrom, leader of the Microscale Applications group at the JGI, whose team uses a … as machine learning and AI promise new ways of harnessing large datasets, JGI researchers and users are looking for …

P. psychrophila genes drive resilience when salinity fluctuates. The Science … uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to determine which genes are … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …

… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … has another supercomputer, Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also …

… , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel … of the genome). Lovell et al. focused on the 4X variety, largely because it’s been prioritized in breeding efforts, …