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Jane Grimwood Named HudsonAlpha Genomics Chair
… was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the Center staff that moved to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …
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JGI Scientists Pen Genome Watch Articles
… are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … for more sustainable agriculture and was written by JGI computational biologist Rekha Seshadri. Writing the  … each year.  Until then, the column had been written solely by scientists affiliated with the Wellcome Sanger Institute …
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Taking Stock of the Known and Unknown Microbial Space
… of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over …
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Green Algae Reveal One mRNA Encodes Many Proteins
… species of algae and kept seeing what looked like mistakes by the gene prediction algorithms. I decided to dig in a … of Science user facility. The work was partly enabled by the “Facilities Integrating Collaborations for User …
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Improving the Cacao Genome and Phytozome
… cacao  – the tree that produces cacao beans – was released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha Institute for … genome for  T. cacao has now been completed and released by HudsonAlpha scientists, with the help of funding from …
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Help from Citrus’ Bitter, Hardier Cousin
… secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last …
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Tina Clarke
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2025 NeLLi Symposium
… (including LBNL students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, … for cultivating new bacteria and archaea revealed by a recent genome census . A key outcome will be a a … and the tour. (Participants will meet at the hotel lobby to take a bus.) * Optional Field Trip to Red Rock Canyon …
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Eelgrass Proves to Be Much Younger Than We Thought
… This study was supported by a PhD scholarship from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. Eisen, J.J.S. and J.L.O. from the US …
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Doubling Down on Known Protein Families
… a novel approach to better understand microbial communities by looking at protein function within them. The work was led by a team of scientists at the U.S. Department of Energy … proteins with massively parallel computations.”  Guided by JGI scientists, the team embarked on a mission to unveil …
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Tracking the Origins of Methane-Producing Microbes
… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … the complete set of genes needed for hydrogen-dependent and CO2-reducing methanogenesis.  These two things combined led …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice Awards . … team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing Project. The award recognized … team. “They produced fantastic scientific results this year by assembling a collection of large datasets that will …
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