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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids … agricultural staples and candidate bioenergy feedstock crops, are recent polyploids. Crop breeders have harnessed …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … Database has matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … DE-SC0012460 (to M.J.H.). Work conducted by the DOE Joint Genome Institute is supported by the Office of Science of …
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A Step Toward Controlling Soybean Rust
… world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi … of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio …
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data … Proposers are encouraged to review the JGI’s sample requirements . Samples that are …
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New Research Sheds Light on Diversity in the Deep Sea
… crust that emit hot, mineral-rich water. These vents are too deep in the sea to get any sunlight, and yet they still … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … communities, with possible applications in biogeochemical engineering,  biofuel production and more. …
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The Case for Conservation
… sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … The work conducted by the U.S. Department of Energy Joint Genome Institute was supported by the Office of Science of …
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JGI@25: Studying Sorghum’s Survival Skills
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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