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Tanja Woyke Elected to American Academy of Microbiology
… from 118 nominees. The selection process for AAM Fellows is based on their records of scientific achievement and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… of the polyploid reference line is simply not true based on previous pan-genome studies. Thus, we must compare … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Crysten Blaby-Haas
… the Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … Comm 15:3167. Hammack AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev … Google Scholar … Education … Awards and Service … Selected Publications …
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Nigel Mouncey
… and Biotechnology (2021) 2016 World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for … Program … Education … About the JGI Director … Selected Publications … Awards and Honors …
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How to Target a Microbial Needle within a Community Haystack
Summary The traditional shotgun metagenomics approach to learning more about environmental samples starts with …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
CheckV, assesses viral genomes, and grades their quality based on completeness. Along with expanding the viral …
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Supercharging SIP in the Fungal Hyphosphere
DNA is manually separated into a few different groups based on its density — DNA containing isotopes is “heavier” … variety of microbes, including both bacteria and archaea, actively engaging with the fungi — highlighting the …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… molecules. So they’re involved anytime you make an amine-based molecule — a very critical role,” he said. These … specificity. However, different organisms use different active residues to achieve this, a bit like having slightly …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
Our method clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of …
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Applying Viral Genomics Expertise to Understanding the Human Virome
Biotechnology , 2024), and iPHoP , an integrated machine learning framework to maximize host prediction for … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Rex Malmstrom
… bacterium with DNA contained in metabolically active, membrane-bound organelles. Science  376,1453-1458 … (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of soil microbiomes using BONCAT-FACS.  … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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JGI Scientists Pen Genome Watch Articles
… a spotlight on  ammonia oxidizing archaea and what we’re learning about their metabolism . And postdoctoral … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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