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Olpidium, The Key to the Origin of Terrestrial Fungi
… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Jeremy Schmutz
… from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant … Selected Publications …
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Axel Visel
… Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … tolerant CAM plants, Agave deserti and Agave tequilana. BMC Genomics  14, 563. May D, Blow MJ, Kaplan T, McCulley DJ, … Selected Publications …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… “It’s 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another … the entire cell.” The JGI team then used single cell genomics to analyze five of the bacterial cells on the … magnifica extreme size, and whether or not pepins are present in other bacterial species. The precise formation of …
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Adopt-A-Genome
… publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt …
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Isolation and Characterization of the Prochlorococcus Carboxysome Reveal the Presence of the Novel Shell Protein CsoS1D
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Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
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Hydrazine Synthase, a Unique Phylomarker with Which To Study the Presence and Biodiversity of Anammox Bacteria
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … , these environmental metagenomes began to offer a window into viral existence. Along with highlighting the viruses in … and metagenomes, called geNomad (watch Antonio Camargo present on IMG/VR v4 at the 2022 VEGA meeting below). …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … pathway predates the Euryarchaeota lineage and was present in the last common ancestor of the Euryarchaeota and … mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced …
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A vast collection of microbial genes that are toxic to bacteria
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A simple, fast, and accurate method of phylogenomic inference
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