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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory … Advanced Research on the Biology of Tree and Forest Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature … The U.S. Department of Energy Joint Genome Institute …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five … a review of Natural Prodcast on Apple Podcasts, Google, Spotify, or wherever you got the podcast. If you have a …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … instead of lysing them, which appears to be prevalent in marine environments, they were predicted to simply abide … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon … majority of the ground cover in peatlands. These boggy ecosystems are acidic and have very little oxygen, which is … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … coexist is key for understanding their impact on wider ecosystems, but these symbiotic interactions are difficult … This research was supported in part by the Allen Distinguished …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, … Fungal Genomes on MycoCosm portal …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … their research of these newly found methanogens  in diverse ecosystems with  support from a DOE Established Program to …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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