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Busting the Unbreakable Lignin
… for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 (MAO), US Army Research Office contract W911NF-19-1-0010 (MAO), National Science Foundation grant MCB-1553721 … Michigan State University). The work (proposal: 10.46936/10.25585/60000889) conducted by the U.S. Department of Energy …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of … Maxon, Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI …
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Gut Fungi: Unexpected Source of Novel Chemicals
… californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. … under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). CLS is also supported by a National Science … Computing from the CNSI, MRL: an NSF MRSEC (DMR-1121053) and NSF CNS-0960316. …
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Doubling Down on Known Protein Families
… families. From there they focused on families with at least 100 members.  “If you have 100 sequences, the quality of the cluster is significantly higher because it is very hard to have 100 sequences from different locations or habitats that …
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iPHoP: A Matchmaker for Phages and their Hosts
… pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the …
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JGI-UC Merced Interns Share Their 2021 Experiences
The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a …
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JGI announces 2024 Functional Genomics awardees
… are accepted year-round; the next deadline is Jan. 30, 2025. …
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Fishing for Novel Cellulose Degraders
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology … genomic catalogue of Earth’s microbiomes. Biotechnol . doi: 10.1038/s41587-020-0718-6. Wood-Charlson EM, et al. 2020. … (MIMAG) of bacteria and archaea. Nature Biotechnol. 35, 725-731. Paez-Espino D, et al. 2016. Uncovering Earth’s …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were sequenced … the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of Energy …
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You Can Move, But You Can’t Hide
Biological and Environmental Research (BER) (89233218CNA000001 to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., DEAC05-76RL01830 to P.N.N.L.), and used computational resources from …
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