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JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State …

The PhycoCosm data portal allows anyone to freely investigate the genes of … is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … data scientist Alan Kuo at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …

…   Each year, the JGI accepts proposals for state-of-the-art … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six researchers …

… a scientific contribution? This session will demonstrate to students (and their mentors) how to begin establishing a … get credit for their contributions to science. A panel of DOE researchers, program managers, and intern alumni will introduce projects designed for students to gain research experience …

… handles droughts, floods and poor soils. This is the first paper that describes sorghum’s response to drought, … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and … throughout the duration of the experiment, equal to the amount of water lost through evaporation in the leaves. Each …

… of four anaerobic fungal species has revealed, for the first time, that this group is unexpectedly powerful: they … in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible … clearly have unexpected chemical potential. … This research project was supported by a grant from Santa Barbara Cottage …

Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded … A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. 2022. …

… 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna Lee developed two … genomic DNA or complementary DNA (cDNA), reducing the amount of time it takes to produce a dataset from months to … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …

… paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA stable isotope probing (DNA SIP) relies on incubating DNA with isotopically-labeled compounds to link active microbes … Berkeley National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … …

… habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … whole genome data of Olpidium. This required an enormous amount of effort in collecting genetic material of Olpidium. … revealed that the branches among Olpidium and the first few splits in the non-flagellated terrestrial fungi …