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Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly-present and future challenges.
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Tissue Cultivation, Preparation, and Extraction of High Molecular Weight DNA for Single-Molecule Genome Sequencing of Plant-Associated Fungi
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IMG/M: a data management and analysis system for metagenomes
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Fungal Friends or Foes in Plant Roots
… bioenergy feedstock crops. Summary A plant is like an office building, its roots are akin to the ground floor … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … with Cole and Serrano to collect and analyze the single nuclei and spatial transcriptomics data this work …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … with Cole and Serrano to collect and analyze the single nuclei and spatial transcriptomics data this work …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab. In … analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional testing of these …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human chromosome 19 The DNA …
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Jeremy Schmutz
… 5, 16, and 19. Following the completion of the human genome project in 2003, he developed sequencing, assembly, and … science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. Schmutz provides scientific project management for the reference eukaryotic genomes produced by …
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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