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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … accessible metagenomic datasets from a wide variety of ecosystems around the world, conducting iterative searches …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss … work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with …
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Viruses Reprogram Cells into Different Virocells
… viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, … from The Ohio State University and the University of Michigan studying how virus infections cause significant … changes in marine microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa … to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … Bushley of the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how …
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Maureen Berg
… developing new high-resolution and high-throughput methods to link uncultivated viruses to their host. With these new methods, she hopes to expand our understanding of the roles that viruses play in their ecosystems, particularly in freshwater ecosystems. …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … “Without a culture, or without some kind of test to even look if these genes are expressed, you have to be very …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is …
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New Research Sheds Light on Diversity in the Deep Sea
… crust that emit hot, mineral-rich water. These vents are too deep in the sea to get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … volcanoes,  researchers studied microbial communities across five oceanic regions. In doing so, they found a high …
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Ben Bowen
… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & … Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for Exceptional Achievement 2012 UC Berkeley, …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from … In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every … project depends on lakewater samples — so this episode is a look at how researchers get these specialized snapshots of a …
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A Powerful Technique to Study Microbes, Now Easier
… collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity …
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