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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing … U., Cadillo-Quiroz, H., Garcia-Pichel, F., & others (2015). Exometabolite niche partitioning among sympatric soil … Sun, T., Wang, T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Examples: Successful LOIs & Submissions
… examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful … and Facilities Integrating Collaborations for User Science calls. These documents have been shared with …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the … as Adjunct Scientist at the Bigelow Laboratory for Ocean Sciences and as Associate Adjunct Professor at the … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … and hopefully will be part of such a highly motivating and collaborative research environment such as JGI/LBNL. What …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions …
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … Genomics and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on …
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