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JGI@25: Studying Sorghum’s Survival Skills
… and the first C4 crop to be fully analyzed. 2014: The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 plants for biofuel … received its fifth update. Another 31 varieties have also been sequenced, and the EPICON studies are still informing …
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An Integrated Dataset to Understand Ecosystem Interaction
… a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of … Data Collaborative ( https://ror.org/05cwx3318 ) is supported by the Genomic Science Program in the U.S. …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! … eminent leaders in the field of microbiology and are relied upon for authoritative advice and insight on critical issues … single-cell microbial genomics and giant virus studies has been groundbreaking. The JGI is most fortunate to have …
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JGI-KBase Panel at SACNAS
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Enlarging Windows into Understanding Gene Functions
Ronan O’Malley , who leads the Sequencing Technologies Group. In an article published November 25, 2021 in Nature … It can also identify cases where transcription factors have been repurposed during evolution to control new functions,” … but their functional interpretation is as tough as it has been 10 years ago,” he said. “We thought about …
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Fishing for Novel Cellulose Degraders
… to attract specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. … caught several microbes from known cellulose-degrading groups, the researchers also hooked and were able to … Institute, a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. The work was …
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Tracing the Evolution of Shiitake Mushrooms
… mushrooms are white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s … still roamed central Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in … P450s. This includes the species L. raphanica, which has been able to adapt to habitats from Alabama to Brazil, …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
The Impact For decades, the liverwort  M. polymorpha has been used as a model for evolutionary studies. Its place … lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome … ), a DOE Office of Science User Facility, is supported by the Office of Science of the US Department of …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… has a rich back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes … that we studied are involved in transfer of the amine group, or the N group, to a variety of different molecules. So they’re involved …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… sure we could even complete a full project. Every other group I contacted was happy to offer advice but declined to … thank JGI enough for being willing to take a risk on a group of public high school students to see this project … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Better Crops With a Pointillist Approach to Plant Genomics
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Partnering with CalTeach – Training the Next Generation STEM Workforce
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