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How Microbes Can Protect Plants in Drier Straits
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice Awards . … went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing …
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Tanja Woyke
… Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … Highly Cited Researcher, Biology and Biochemistry, top 1%, by Clarivate Analytics 2020 van Niel International Prize for … Microbial Genomics Conference (2017-current) Genomic Standards Consortium Advisory Board member (2018-current) …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … have learned to adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, … variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six …
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JGI@25: Building a Better Bean
… as a biofuel. To this end, a team of researchers led by Jeremy Schmutz of the JGI and the HudsonAlpha Institute … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … different labs to be able to sequence a genome.” Since the paper was published in 2014, it has been cited 1,025 times …
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Forming Scientific Connections and Building Community
… This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds …
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and cultivated … have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral … ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of … and hydrogenases. Click here to read the “Behind the Paper” blog post by Paula Matheus Carnevali. …
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Massie S. Ballon
… UC Managing Implicit Bias Certification 2020-present, Project Management Professional (PMP) Credential Graduate …
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User Programs
… synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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You Can Move, But You Can’t Hide
… and their genetic sequences. The software was created by researchers under the direction of Microbiome Data … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …
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JGI@25: From Life at the Extremes to Editing Genomes
… for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a revolutionary impact on … CRISPR systems. The collaboration has resulted in several papers, including one in 2018 on the discovery of miniature … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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