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Bacterial and fungal composition and exometabolites control the development and persistence of soil water repellency
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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. … the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … by the reviewers. The ranked proposal list, along with a recommendation from JGI management, is then forwarded to DOE …
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Virus Discoveries that Keep Getting Bigger
… Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … The Impact In their existence as large, cosmopolitan, and complex parasites, giant viruses often infect microeukaryote … Emiliania huxleyi, a microeukaryote, forms large algal blooms in the ocean that cycle environmental carbon and …
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Supercharging SIP in the Fungal Hyphosphere
… microorganisms live in complex communities, like within soils or the gut, they are difficult to study individually. … National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … play a critical role in sequestering carbon and mitigating greenhouse gas emissions, and understanding how to improve …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) …
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JGIota: The Algae Nicknamed ‘Chlamy’
… This shorter episode is about a tiny, single-celled alga – Chlamydomonas … works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other organisms – …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … together, they found most bacterial genomes from water and soil communities were at least 80% complete when studied …
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Integrating Experimentation with Data
… $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular … and environmental science. They provide the scientific community access to cutting-edge capabilities for … proposal process—enabling researchers worldwide to explore complex biological and environmental systems using advanced …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Soils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
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