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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining …
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Introducing New Members of the JGI User Executive Committee
… Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became Director of Research at …
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Promoting the Power of Viral Metagenomics
… piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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An Automated Tool for Assessing Virus Data Quality
… Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and … scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section on international genome miners, … Dr. Francisco (Paco) Barona- Goméz is a Principal Investigator at Cinvestav …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were also … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Natural Prodcast Episode 3: The Primer, Part 3
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … is here ) so you understand what’s happened so far in the conversation between me and Alison. In the previous episodes we talked … Prodcast, and the third and final part of our Primer conversation, where we’ve introduced concepts in natural …
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JGI Launches Latest Strategic Plan
… Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide … JGI supports, include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. As a result … and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s mentor during her 2018 … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look … than ever before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost … They may also provide a basic understanding of the roles microbiomes play in determining the behavior of the physical …
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