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Waiting to Respire
… ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… contributing to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic … aquifer in 2007 to achieve this goal. In less than four years, parts of the shallow portions of the groundwater were … the National Center for Research Resources (NCRR) (5P20RR016480-12) and the National Institute of General Medical …
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JGI@25: Building a Better Bean
… a 473-million basepair genome of the common bean, identifying genes related to disease-resistance, flowering time, … iron content and have a longer shelf-life — up to four years. Work is now underway to transfer the trait into other …
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Learning to Look
… databases. In this case, the machine “learned” to identify a certain type of bacterial viruses or phages called … 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like sequences compared to … you’ve found the right features that you can use to identify the inoviruses.” Overhauling the Perception of Inovirus …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… the project. Also my area of expertise over the past couple years is a little bit different from what I did during the …
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Building Sphagnum Genomic Resources
Science Fund (FWF, P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI (CSP 605), the German Research Foundation …
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Supercharging SIP in the Fungal Hyphosphere
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Pinning Down a Piece of Photosynthesis
… light, transport molecules and regulate reactions. Identifying these proteins and then figuring out what they are … set out to tackle some of these genes, expressing and purifying the range of proteins these genes produced, to identify examples that would work well for  in vitro  and  in vivo …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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UC Merced Interns Reflect on Their JGI Summer Projects
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… scientists want to take a further look into identifying genes related to biotic stresses to better understand … research and innovation program (grant agreement no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) … Zurich, grants from the Swiss National Science Foundation (160004, 131726), the EU’s Horizon 2020 research and …
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