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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Publication Policy
… for publication and the responsibility for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Driving through stop signs: predicting stop codon reassignment improves functional annotation of bacteriophages
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Improving Synthetic Biology Communication: Recommended Practices for Visual Depiction and Digital Submission of Genetic Designs
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … Program Deputy Axel Visel for driving the monumental effort, which considered input from scores of individuals, …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan … and future developments, and how the JGI can be part of that space.   …
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science …
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iPHoP: A Matchmaker for Phages and their Hosts
With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … this program,  described in Plos Biology , the research team led by scientists at the U.S. Department of Energy … This information could open the door to improving crop yields and a better understanding of the roles viruses …
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David Goodstein
… focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … comparative genomic systems as the JGI’s eukaryote research efforts expanded to include basal metazoans and plants. Working with a talented team of scientists and software engineers, Dr. Goodstein …
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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