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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
Learn more
For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … crust, there is a vast ecosystem connected to the global carbon cycle. Archaea are key players in this deep biosphere. They … This research was supported in part by the Allen Distinguished Investigator Program, …
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Year in Review: JGI’s 2018 Progress Report Available Now
… highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, … and to better understand their roles in the global sulfur cycle. Copies are available online – click here to go …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … microorganisms therefore play a critical role in the global carbon cycle, and are of significant interest for their potential … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … In this episode, Alison and I talk to Marnix Medema, from Wageningen University in the Netherlands. Marnix and his …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … talk): “Effect of drought on soil microbial metabolisms driving carbon allocation and volatile organic compound cycling in …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … microbes that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by … (IMG/M) suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … economic value as both biofuel feedstock and their role in carbon sequestration. Poplar trees grow quickly in a variety … soil chemistry offers insights into how these ecosystems cycle nutrients like nitrogen and carbon, as well as …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment … known to be key contributors to the planet’s biogeochemical cycles, but the vast majority remains uncultivated and … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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