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XA21-mediated resistance to Xanthomonas oryzae pv. oryzae is dose dependent
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own … collaborated with each other on new ways of presenting and researching science. …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … projects through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … Computing from the CNSI, MRL: an NSF MRSEC (DMR-1121053) and NSF CNS-0960316. …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … is part of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … addressed in the study were found to control more than 100 genes, one of which was directly characterized by …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … University of Tokyo … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in …
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You Can Move, But You Can’t Hide
… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … Computing Center (NERSC) (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated under …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in … they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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