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Kjiersten Fagnan
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Katherine Louie
… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen BP, … in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie KB, Trinh M, …
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Understanding Wildfire Recovery, Starting in Soil
… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, … Integrating Collaborations for User Science (FICUS) initiative . In this program, researchers leverage the …
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JGI Announces 2023 Community Science Program Awardees
Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a … and we look forward to facilitating their success. “ The CSP Annual Call is focused on large-scale genomic science …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … dependent on the other for required nutrients—is genome size. The obligate symbiont’s genome is often reduced compared to that of a free-living …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms or environmental DNA, and … help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic capabilities with the …
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