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Metatranscriptomes of California grassland soil microbial communities in response to rewetting.
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Microbiome composition modulates secondary metabolism in a multispecies bacterial community
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A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC … receive from our faculty.” Cristhian and Bryan interned with Zhong Wang and Tanja Woyke, respectively. Both of their …
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Cultivating Symbiotic Antarctic Microbes
… they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and … of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial …
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Fishing for Novel Cellulose Degraders
… of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For …
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2025 NeLLi Symposium
… 48″ wide or less to ensure 2 posters fitting on the boards. JGI posters are typically printed in the ARCH E size which works well with the poster boards we have requested. … Please note that … Functional Annotation Lead Steven Ahrendt , Biosystems Data Science … Brian Hedlund , University of Nevada, Las Vegas …
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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … prediction approaches, researchers have created a new program called iPHoP (pronounced “eye-pop”,  freely …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean … from the US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … our collaborations and capabilities to enable great science that will help solve energy and environmental … — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … workflow that reduces the time and cost associated with this purification step, and Baumgart continued and … Center in Hungary. His approved proposal through the JGI’s Community Science Program (CSP) focuses on a fungal …
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