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High‐resolution phenotyping of sorghum genotypic and phenotypic responses to low nitrogen and synthetic microbial communities
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … power of metagenomics,” Hatzenpichler said. “It’s great to collaborate with the JGI because with that, we have a much …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … at the University of Hawai’i at Mānoa. I recently caught up with Karolina at the Plant and Animal Genomes, or PAG … were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s …
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Defining a Pan-Genome for Antarctic Archaea
… on Antarctica distinct and unique. In collaboration with the DOE Joint Genome Institute, a DOE Office of Science … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team … Research Council (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For …
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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … outcomes of these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the …
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JGI announces second round of 2023 New Investigator awardees
… Tlaskal, Fernando Torralbo, Luis Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each … proposals — through the New Investigator call under our Community Science Program .  Below find a list of the second …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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Tracing the Evolution of Shiitake Mushrooms
… sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes … Genome and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental …
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