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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he developed a high … bacterial cells and amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. …
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Gut Fungi: Unexpected Source of Novel Chemicals
… off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of energy, and … compounds may also be involved in how the fungi metabolize plant biomass, which could inform how scientists can more … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Expanding Universe of Methane Metabolisms in Archaea
… insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions … metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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New and Improved: Eucalyptus Reference is Now Accessible
… Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | … are 900 species of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted …
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Extracting the Secrets of Secondary Metabolites
… combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary … in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the National Academy of Science the week of December 2, 2019. While sorghum is drought-tolerant, the crop’s precise …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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When “The Blob” Made It Hotter Under the Water
… began in late 2013, when a large patch of warm ocean water about a third the size of the United States began forming in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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