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… (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …

… Using this workflow, the team combed through more than 5,000 data sets of RNA sequences (metatranscriptomes) … work resulted from a three-way collaboration that began in 2019, recalled Uri Neri of Tel Aviv University, one of the …

… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 … Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional genomes added to it, nor … updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for …

… For the last 15 years, Ray Turner has been one constant for the Joint … Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for the Joint … 2008. Ray won the  Director’s Award for Operations in 2017 in recognition of his tireless efforts to ensure the …

… the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or … DNA base is a methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …

… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the … that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most …

… giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … heads JGI’s  Microbial Program . The team mined more than 8,500 publicly available metagenome datasets generated from … out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in the …

… and how ecosystems are adapting to stresses. A total of 17 proposals have been approved through the annual Community … Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent submitted. Many of the proposals focus …

… data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI … working with us please contact me at [email protected] 5.  Q: If we have RNAseq or proteome data that is based on a … scale CSP and FICUS with March 24 and March 17 deadlines. 25-30% of proposals are selected, pretty high in comparison …

… (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin … Laboratory (BNL). The Fe deprivation RNA-seq (proposal:  10.46936/10.25585/60001386 ) was conducted by the U.S. Department of …

… is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in …