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Draft Genome Assemblies of Ionic Liquid-Resistant Yarrowia lipolytica PO1f and Its Superior Evolved Strain, YlCW001
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … ) and the grass Brachypodium distachyon ( 2017 ), have identified many more genes than found in the single reference …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel … Heart, Lung, and Blood Institute in August 2018 Travis Lawrence (2014 graduate intern): Accepted a post-doctoral …
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A One-Stop Shop for Analyzing Algal Genomes
… data scientist Alan Kuo at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), have … PhycoCosm has many components that make it useful for scientific inquiry: it shows a full phylogenetic tree of more …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional machineries. Nat …
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Refining the Process of Identifying Algae Biotechnology Candidates
… can be refined for best results, often by starting with identifying the right ingredients. Researchers collaborating … involving researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), the …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… oxide). Summary To do this work, the international scientific team led by Petr Baldrian of the Czech Academy of … The team worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, to create the …
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). To … Approximately 150 archaeal viruses had been previously identified. The JGI researchers surveyed publicly available data …
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An Integrated Dataset to Understand Ecosystem Interaction
… how healthy they are, a recent data set  outlined in  Scientific Data connects molecular features to large … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of …
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Dealing with Drought: Uncovering Sorghum’s Secrets
U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). The … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… rapid environmental changes. Researchers were able to identify specific genes that allow the algae to adapt to sudden … and sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). In …
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