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Trent Northen
Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy Institute … metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes …
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Cultivating Symbiotic Antarctic Microbes
… are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and ‘omics … with the humans and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of … from environmental samples and cultivated microbes, researchers have been able to gain further insights about …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division of … nutrient. The Impact This study is the first to dig into a forest floor ecosystem to discover what carbon- and … on and in forest soil also better enriches models of global carbon and nitrogen cycling, both on the ground and …
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How to Target a Microbial Needle within a Community Haystack
… complex environmental samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine … the vast majority of microbes that play key roles in global biogeochemical cycles remains unexplored and … collected using fluorescence activated cell sorting (FACS) into smaller, less diverse pools before being subjected to …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In … pieces of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … reported in  Applied and Environmental Microbiology , the researchers engineered root bacteria  Pseudomonas  and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets … Stable Isotope Probing (SIP) has opened vast windows into specific activities catalyzed by microbial communities. … will help grow and improve high-quality datasets, enabling global insights from modeling, machine learning, and …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … composition of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel … known methanogens. With the help of this information, the researchers found evolutionary relationships between …
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Access to Rock Star Scientists
… had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered …
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JGI@25: Building a Better Bean
… bean’s close relative, as a biofuel. To this end, a team of researchers led by Jeremy Schmutz of the JGI and the … time-consuming and involved a lot of different players and researchers across many different labs to be able to … seemingly humble common bean has fueled further research into disease tolerance in crops, drought- and …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… human chromosomes: Lawrence Berkeley National Laboratory researchers were studying Chromosome 5, which contains about … and diabetes mellitus. Los Alamos National Lab researchers investigated Chromosome 16, which contains about … 1997. Over the next seven years, and in collaboration with researchers at the Stanford Human Genome Center, JGI staff …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a … group through the  DOE Office of Science Graduate Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants … land for biomass production — that can be converted into biofuels and bioproducts — would further drive a strong … Published  May 2024 in  Nature Genetics by an international research consortium led by the University of …
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