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Toward a Data Infrastructure for the Plant Cell Atlas.
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JGI Announces 2025 New Investigator Portfolio
… fungi, the effects of biochar on rhizosphere microbiomes, and the metabolic pathways of algae. They will … plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals are accepted … 9, 2025, for inclusion in the November 2025 review. You can also find more information about the JGI’s  various …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… is trying to understand how the molecules in tiny microbes can impact whole ecosystems. Part of the reason he’s asking … crowded place. ED: I mean I really think we’re at a unique time in human history, where we’re moving from when my … generations. And so, you know, and the real question is, can we do this without, you know, [beep]ing the proverbial …
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Training the Next Generation of Talent
Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … whose research interests and experiences overlap significantly with the goals of the program could be considered.” … as it’s getting closer to producing trillion base data sets on daily basis.” As part of their learning experience, …
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Publication Policy
… data produced at the facility, provided this is done in a timely fashion. The publications resulting from such efforts … is expected to include all those contributing significantly to the work. The JGI has significant experience and capabilities in the analysis, …
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Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms
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Expanding Virophage Diversity
… mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for … were found in diverse habitats including the air, plant rhizosphere, wastewater, and even animal and human …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants … crossbreed before genome doubling. In allopolyploids, the set of chromosomes from each ancestor is called a subgenome. … Session said.  The Kmer Subgenome Identification method can be  accessed here so that, Session said, other …
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Exometabolite niche partitioning among sympatric soil bacteria
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Tackling soil diversity with the assembly of large, complex metagenomes
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A genomic perspective on stoichiometric regulation of soil carbon cycling
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Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil
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