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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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JGI@25: Stories from Intern Alumni
… . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and … to enable great science that will help solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. From field …
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Building Sphagnum Genomic Resources
… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … the untapped potential waiting to be unearthed in sequencing and analyzing uncultivated microbes. Summary The …
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Complete Genome Sequence of Nitrosospira multiformis, an Ammonia-Oxidizing Bacterium from the Soil Environment▿ †
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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Deconvolute individual genomes from metagenome sequences through short read clustering
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Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Lake Washington Sediment
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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