Results

FICUS-NERSC/KBASE
… more customized analysis, the JGI also participates in publication of results. …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and … from infecting viruses and phages. In the event of a new infection, the microbes use the genetic information … showcase of the unique capabilities provided from the IMG/M database in enabling new discoveries and is a continuation …
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Steven Wilson
… that pushed instrument run information directly into the database rather than depending upon error prone, manual …
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… it was involved in shattering by turning it off. “It’s a new shattering gene variant identified in a natural …
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Doubling Down on Known Protein Families
… beam — worse, they didn’t even know how big the room is.  A new study  published online Oct. 11, 2023 in  Nature … Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully crafted the Novel Metagenome … Protein Families (NMPF) Catalog.  “We can now analyze new datasets by comparing against these protein families, or …
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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