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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many … improving soil microbiomes for carbon capture or removing harmful substances from the environment, viruses could play …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … systems. We optimize our service to the community through responsibly managing our people and resources.     … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … readers to get involved in the developing field of virus ecogenomics. While microbes regulate the planet’s … be the foundation upon which researchers can develop high-throughput and high-resolution studies of interactions …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer advice, …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other traits when … place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other … Dehalococcoidia have a knack for degrading the kind of harmful chemicals found in pesticides and refrigerants. …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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A korarchaeal genome reveals insights into the evolution of the Archaea
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Murine colitis reveals a disease-associated bacteriophage community
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Olga Genilloud
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