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… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment … shared how research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology … discovering that phenazine producers are enriched in the rhizosphere but also abundant everywhere in the earth’s …

… Harnessing BER-funded data resources, researchers built an … database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … understand the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list …

… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers …

… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would … us and we’ll work work it out 2.  Q(uestion): Do you publish the data sets the trees are based upon? A: This is still …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for … planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department …

… By studying the structure and function of a cyanobacterial protein, … carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and cyanobacteria … dioxide and water into oxygen and sugars. How photosynthesis works, though, is much harder to pin down.  …

… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … National Laboratory, Rebecca Smith of the University of Wisconsin, Maggie Sogin of the University of California, … and their microbiomes. She is exploring the seagrass rhizosphere in her ongoing CSP New Investigator proposal. As …

… In 2003, Dr. Pennacchio joined the DOE Joint Genome … molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a Deputy … Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor …

… fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying how these compounds are … fungi, algae and plants. These compounds are key to organisms' interactions with their environments and with each …

… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … large-scale proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 … redistributing water availability. By sequencing the millet rhizosphere and endosphere communities both with and without …

… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … forest floor, a team of researchers have found that there is a striking division of labor between the two groups. … leaf litter on top of the soil, the roots of the trees, the rhizosphere soil (soil under direct influence of the roots), …