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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. … Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops … team is unbureaucratic and driven by code, without putting humans in the loop. He is a big proponent of empowering …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … and the proposal focuses on investigating the repeated evolution of three traits relevant to DOE interests: … Nanyang Technological University aims to generate genome sequences from underrepresented green algae groups in a wide …
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … algae, and plants, while focusing on understanding the evolution and function of proteins involved in metal … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … plant’s traits and genetic diversity,” said John Lovell, an evolutionary biologist at HudsonAlpha and first author of … to detect climate-gene matches, which can be exploited for accelerated crop improvement. “Because of the DOE’s …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Evolution and expression of core SWI/SNF genes in red algae
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The octopus genome and the evolution of cephalopod neural and morphological novelties
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Evolution and comparative genomics of the most common Trichoderma species
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Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes
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