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JGI Contributes Eight to 2023 Highly Cited Researchers list
… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … ancestors. Tanja Woyke contributed to a study in ISME Journal that identified flagella in the terrestrial ancestors … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Nigel Mouncey
… joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of … and Bioprocessing R&D Director and Leader at Dow AgroSciences in Indianapolis. During his time in industry, Dr. … and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility.  …
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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … team. The work was a joint effort led by scientists at the Center for Advanced Bioenergy and … to novel traits. M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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Supercharging SIP in the Fungal Hyphosphere
… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live … HT-SIP is a capability available to request through  the JGI proposal calls . …
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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive … and education communities access and build on the JGI’s resources. The UEC represents the JGI user community and is … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of firsts, including the flagship internship program between … success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses …
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Astrovirology: how viruses enhance our understanding of life in the Universe
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … Program Director, Berkeley NHGRI Training Program in Genomics and Computational Biology …
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