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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … heavily invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool … cell’s genome is missing from the final assembly. So while researchers are confident all the DNA sequences came from …
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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … the highly polyploid sugarcane, an international team of researchers has successfully assembled a first monoploid … of the world’s sugar, which is of interest to bioenergy researchers who want to develop sustainable alternative …
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Cultivating Symbiotic Antarctic Microbes
… they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and ‘omics … from environmental samples and cultivated microbes, researchers have been able to gain further insights about … This work was supported by the Australian Research Council (DP150100244) and the Australian Antarctic …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … eelgrass adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature Plants , was … and Portugal. In order to develop a timeline like this, researchers would normally craft a genetic clock based on …
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JGI & KBase at PAG XXVII
… representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with … can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to … host a  workshop on DOE Biological and Environmental Research (BER) Plant Genomic Science on current and ongoing …
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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … ability to fine-tune the level of gene expression allowed researchers to identify variations of essential genes in … chair at the University of Texas, Austin, and included researchers at the U.S. Department of Energy (DOE) Joint …
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JGI Launches Latest Strategic Plan
… — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … funders at the DOE Office of Biological and Environmental Research (BER), among others. New areas of emphasis, for those who are already familiar with the research portfolio that the JGI supports, include JGI’s …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … plant growth hormones. One other tidbit that caught the researchers’ attention is that the poplar cuttings had …
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … structures, as well as atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and … samples was a global collaboration that brought together 39 researchers from eight different countries. Genome and …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides … ethene. Applying genome sequencing and analysis, the researchers identified other bacteria and microbial …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … (DOE). (Poplar is a Flagship Plant.) To engineer them, researchers need to select and breed cultivars for the next … understand how sex determination works in shrub willow, researchers investigated the structures of the sex …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … roughly 5-7,000 years ago and has been well-studied by many researchers for nearly five decades. In these frigid … the University of New South Wales, Australia, and included researchers at the U.S. Department of Energy (DOE) Joint …
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