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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … Ph.D. in Bioengineering, University of California, Berkeley Postdoctoral training in Biochemistry, University of …
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Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel … registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. …
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Ben Bowen
State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 … T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …
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Help from Citrus’ Bitter, Hardier Cousin
… a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study …
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Micro-Scale Applications Group
… information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA … additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the … . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida … her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year …
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Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus niger
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the …
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