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… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more … work also used resources of the National Energy Research Scientific Computing Center (NERSC) , which is supported by …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …

… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly … hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to …

… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and …

… the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …

Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … to get a single line of code working and get the desired final output. Being successful in my computational efforts …

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … of the root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … academic achievements (2008) … Education … Selected Publications … Awards and Service …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and …

… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … data analyses and software to enable “grand-scale” scientific projects. These solutions include large-scale … metagenome binning software … Education … Selected Publications … Software …