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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called … heavily invested in being the bridge to help scientists and researchers achieve their analysis goals. Offering this tool …
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Exploring Polymorphisms Created by Transposable Elements
… measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … Data Collaborative.  This award recognizes distinguished research achievements that support open data practices, … Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive … (symbionts) are transmitted between host generations, researchers investigated the role that bacteria living … a likely key to this evolutionary transition. Using this model, researchers also generated the first transcriptomic …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, … The purpose of this Workshop is to illustrate the expansion of this field and bring it to the attention of the wider … the JGI and KBase toward integrative biology and hear from researchers who are applying genomic sequence information to …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main … deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … Martin of the French National Institute for Agricultural Research (INRAE) focused on in-depth exploration of …
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Matt Blow
… these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … the JGI, he worked as a project scientist and then as a research scientist on projects to develop functional genomic technologies and to understand genome function in …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have … human chromosomes: Lawrence Berkeley National Laboratory researchers were studying Chromosome 5, which contains about … user facility. The staff and resources shifted to offering genomic science capabilities for energy and environmental …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of this …   These experiments focused on two species at once: the model legume species  Medicago truncatula and the …
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Statement on the Use of Genomics Data
… Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … Inspired by the Human Genome Project (HGP), and building upon the principles for open access in the field of genomics … at the DOE Office of Biological and Environmental Research program. Following these discussions, the JGI will …
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