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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy … manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing the economy of Rocket City. Grimwood is …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA … captured molecular information from both plant cells and fungal cells. “Because this technology relies on just …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA … captured molecular information from both plant cells and fungal cells. “Because this technology relies on just …
Learn more
JGI@25: Strengthening Soybean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Maximizing soybean yield is critical to energy independence in the U.S. Not only does it pair … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …
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Viruses Reprogram Cells into Different Virocells
… changes in marine microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in … them. In the ocean, viruses outnumber surface microbes 10 to 1, and 20% to 40% of the microbes are infected at any … can thus have significant impacts on the global nutrient cycles regulated by their hosts. For example, microbes that …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements … This is because MGEs can affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … Tools and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m …
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Gut Fungi: Unexpected Source of Novel Chemicals
… complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this … , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of …
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A Plant Root Atlas for Tracking Developmental Trajectories
User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … are hallmarks of different cell types.” His contribution to the paper also aligns with his DOE  Early Career Research … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … mean that the flagellum was retained in some terrestrial fungal lineages for an extended period of time, which would …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes anymore, but their functional interpretation …
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10 From JGI on the 2019 Highly Cited Researchers List
… in the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … that presented the first large analysis of an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play …
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