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Protein structure determination using metagenome sequence data
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Microbiome Data Science: Understanding Our Microbial Planet
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BioPig: a Hadoop-based analytic toolkit for large-scale sequence data
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BAYESIAN SPATIAL-TEMPORAL MODELING OF ECOLOGICAL ZERO-INFLATED COUNT DATA.
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Doubling Down on Known Protein Families
… multiple other research centers around the world. “We’ve more than doubled the number of protein families known up … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The humble lichen is a … variation in its progeny. The study’s transcriptomic data also identified many genes potentially important for …
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Len Pennacchio
DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a … the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code throughout the entire event. All … event is to build a stronger community. Our goal is to create an environment where everyone feels welcome to …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Game On: High School Students Drive Everglades Metagenomics Study
… out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got … through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … rest of the community. These high school students now feel more empowered and equipped for their future research …
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