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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research … of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of their …
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JGIota: Looking Back at Methane-Making Microbes
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … photosynthesize and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple … team studied sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the …
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Rex Malmstrom
… approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to … active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a semi-automated stable … 2016. Visualizing in situ translational activity for identifying and sorting slow-growing archaeal− bacterial …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual Meeting:   Francis Martin on how JGI has changed mycology, excerpted from his talk at the 2015 JGI Annual Meeting:         … Laccaria bicolor on MycoCosm …
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Ian Blaby
… carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal … coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput … and future challenges. Synthetic Biology . 5: 1. 2020 Nguyen et. al., ManiNetCluster: a novel manifold …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the … a variety of methane-mitigation goals. One aim is identifying chemical compounds that could inhibit microbial …
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Supercharging SIP in the Fungal Hyphosphere
… under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231. …
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Massie S. Ballon
Equity & Accountability (IDEA) Chairs Council.   … 2020-2021, UC Women’s Initiative (North Cohort) UC Managing Implicit Bias Certification 2020-present, Project Management Professional (PMP) … LBNL Biosciences Area Organizational Stewardship committee 2020: Lawrence Berkeley National Laboratory Director’s Award …
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Axel Visel
Xu J, Northen T, Visel A , Bristow J, Niyogi KK, Wei CL (2015).  Lineage-specific chromatin signatures reveal a … of lipid metabolism in microalgae .  Nature Plants 1: 15107 Lupiáñez DG, Kraft K, Heinrich V, Krawitz P, Brancati … B, Hecht J, Spielmann M, Visel A , Mundlos S. (2015).  Disruptions of topological chromatin domains cause …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … Unique Capability DAP-seq allows researchers to identify all the sites where transcription factors bind quickly … ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has … helped her in her role at the Lab as well.  One of the 2015 program alumnus Cristhian Gutierrez discussed how his time …
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