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Unique Capability DAP-seq allows researchers to identify all the sites where transcription factors bind quickly … ENCODE project known as FUNCODE. “We noticed a few years ago that there is no shortage of fungal genomes … functional interpretation is as tough as it has been 10 years ago,” he said. “We thought about reconstructing gene …

… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … AN, et al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and …

… 2023 marked a decade since the inception of the flagship … has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought invaluable insights, … beyond. Before breaking for the poster session of the 2023 intern cohort, representative mentors and alumni shared …

… study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … that eelgrass began colonizing the oceans  about 3 million years ago. The study shows that figure is likely closer to a …

… a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published … that those sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The … that in the original strain, a protein called RECQ3 helicase is entirely deleted, potentially resulting in …

Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., … enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). https://doi.org/10.1038/s41579-020-0377-0 S. …

… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …

… a great impact for growers.”   … Glycine max on Phytozome … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … …

… assay with RNA sequencing, they were able to identify the target genes of 11 sigma factors in Streptomyces … and cellular differentiation. The tough part is identifying the set of genes associated with any particular … 18, with the number of factor-gene pairs almost doubling to 399. Two of the 11 sigma factors addressed in the study were …

… distinguish males and females even when plants with multi-year generation times are young and haven’t physically … by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and …