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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … the stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been … of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … University of Tokyo … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in …
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The More the Merrier: Making the Case for Plant Pan-genomes
… traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to … Universidad de Zaragoza and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Gene Expression: From On-Off Switch to Dial
… on, scientists can determine the level of gene expression by the gradations. The Impact Metabolic engineering could … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Waiting to Respire
… ability to produce their own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … Program head Tanja Woyke of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Fungus Fuels Tree Growth
… of particular interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s … of its flagship education program with UC Merced. JGI Director Nigel Mouncey and program organizers Wang, Visel … Participation (CAMP) program, a statewide initiative funded by the National Science Foundation (NSF) that supports …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and … ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established a …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the …
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Expanding Virophage Diversity
Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic …
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