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The Power of One, Amplified
… by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that … showed that the composition of the community was similar across sequencing approaches, that species specific sets of … Lab), employed single-cell sequencing to assess the diversity within and between microbial populations. The work …
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species
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Fungal Friends or Foes in Plant Roots
They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing of ecologically relevant …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… intensifies and accelerates drought and desertification across the globe.  Karolina and I kicked off our …
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Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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Eelgrass Proves to Be Much Younger Than We Thought
… started roughly 250,000 years ago, when eelgrass traveled across the ocean current from Japan to colonize the southern … sequences, while others analyzed single point mutations across the genome or changes to the plant’s chloroplast … Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … a way for researchers to study the planet’s microbial diversity, much of which remains unknown and uncultured in … community to discuss how to move from cataloging microbial diversity to experimental characterization and validation of …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor specialized microbial communities … could have the ability to manipulate plant growth.   Across the phylum, diverse  Chloroflexota show the ability … organic and inorganic compounds. Studying their diverse metabolic capabilities offer insights into how microbial …
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