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Dealing with Drought: Uncovering Sorghum’s Secrets
… such as heat waves, droughts and floods. The planet’s resources are being stretched by a growing human population … of California (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene …
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Enlarging Windows into Understanding Gene Functions
… in the genome by adding tagged transcription factors to a genomic DNA library. “It’s an innovative way to rapidly … factors that you’re going to need to then probe the genomic DNA for the binding sites.” The technology expresses … proteins from a DNA template amplified directly from either genomic DNA or complementary DNA (cDNA), reducing the amount …
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Jeremy Schmutz
Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid … Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic diversifications of five Gossypium allopolyploid … Nature Genetics 52: 525-533. Lovell, JT et al. 2018. The genomic landscape of molecular responses to natural drought …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … white papers to the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA … Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit …
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When “The Blob” Made It Hotter Under the Water
… from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, … and his colleagues collected more than 270 water samples. Genomic DNA extracted from the water samples were sequenced …
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Effects of sample treatments on genome recovery via single-cell genomics
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes
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Identifying the Microbial Cleanup Crew at a Superfund Site
Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … support was provided by the National Center for Research Resources (NCRR) (5P20RR016480-12) and the National …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived … in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial … Woyke and her colleagues harnessed the JGI’s single cell genomics capabilities to assemble, identify, and …
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Single Cell Research Group
… focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … Chris Rinke: Research Officer, Australian Centre for Ecogenomics Patrick Schwientek: Cofounder & CTO, Oralta … … virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes
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