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Rex Malmstrom
His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications … quantitative analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A …
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JGI@25: Strengthening Soybean
… to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … doesn’t yield enough gallons of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the first … immediately spurred further research and additional discoveries. Stacey noted that even prior to the sequence …
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Partnerships: Myco-Ed
Myco-Ed aims to integrate real scientific contributions/discoveries into undergraduate teaching laboratories with minimal overhead (cost of media, ITS sequencing and … and to reduce teaching-lab costs, we have partnered with the Arizona Genomics Institute where high molecular …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial crops such as … to quantify how transitions to higher ploidy could be generating these observed patterns. As many other plant … when switchgrass (and by extension similar taxa) are faced with pronounced environmental fluctuations. New findings …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process … in Nature Biotechnology . Kellogg and her colleagues, along with researchers at the HudsonAlpha Institute for … and applying scientific advances to health, agriculture, learning, and commercialization. Opened in 2008, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding … Biotechnology , 2024), and iPHoP , an integrated machine learning framework to maximize host prediction for … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common …
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Tackling soil diversity with the assembly of large, complex metagenomes
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Global distribution of a wild alga revealed by targeted metagenomics
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Protein structure determination using metagenome sequence data
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Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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Comparative metagenomics reveals impact of contaminants on groundwater microbiomes
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Unlocking the potential of metagenomics through replicated experimental design
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