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… 2023 marked a decade since the inception of the flagship … the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … Machine Learning at Pilot Flying J. Nathaniel Brown was a 2022 graduate student intern who is now a graduate …

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, …

Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and … from hidden corners. Nature Review Microbiology , 2022 DeMirci et al. Intersubunit Coupling Enables Fast …

… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … yet abundant subsurface organisms was  recently reported in Nature Communications. The work was co-led by … Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, …

… which microbes are present in a sample, to generate data about which organisms are active, and which microbes are … microbial ecosystems. These communities harbor tens of thousands of different organisms who all consume different … along these lines, all with the goals of better data reporting, improved collaboration, and more comparable …

… at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome … University of Crete, Greece … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse …

… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … and analysis will be performed by the JGI at no cost to the user. … All proposals first undergo technical review by JGI …

Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes …

The chromosome-scale genome sequence of trifoliate orange yields clues to … disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The Sequencing Technologies Group applies cutting edge molecular … sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …