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… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … author Avinash Sreedasyam, a HudsonAlpha senior scientist, about the project. The story is reposted here in modified … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …

… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … of the plant, that eelgrass began colonizing the oceans  about 3 million years ago. The study shows that figure is … and by a grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community …

… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … viruses control them through infection, but little is known about the impacts of these infections on ecosystem …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given … spectrometry-based enzyme activity assay. The work was  reported in  The ISME Journal . While the screen caught …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … bacterial diversity. The team conservatively estimated that about 42% of the bacterial diversity has no genomic …

… Kaushal Sharma, one of five Antioch High School rising juniors … Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s contributions as … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …

… The Science In a recent Microbiome paper , scientists focused on the conifer needle microbiome. The phyllosphere, … pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey showed what … genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett is applying the …

… forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … from a wildfire that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a … look like a year after a fire. It also opens questions about what the soil microbiome looks like over longer times …

… at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . …

… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … would depend on the sample. However, we don’t do this because they typically contain salts and other contaminants that … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution and transition of … the effort that led to the work published in Scientific Reports . Before 2006, Olpidium was one of the many obscure …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … Watch the short video here to see what they had to say about their experiences and what they’ll take with them as … summer projects. Each intern also mentioned what they loved about their internship. Efosa Omorogieva : “The entire …