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Computational Strategies for Scalable Genomics Analysis
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JGI@25: From Life at the Extremes to Editing Genomes
… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … Planetary Science and Environmental Science, Policy, and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … .  The latest article, published January 27, is about engineering plants and their microbiomes for more … Sanger Institute.” Last year for the column, Woyke wrote about the research field’s move toward characterizing the …
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The genomic basis of trophic strategy in marine bacteria
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Life strategies for Aminicenantia in subseafloor oceanic crust
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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three new … of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Genomics of Energy & …
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … to conduct a wide variety of analyses that contribute to a sustainable bioeconomy. Summary The 27 samples studied by …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … the leaf through which carbon dioxide enters the leaf for photosynthesis.  ALISON:  Photosynthesis is what allows …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. … and Development Program of Berkeley Lab, among other organizations. … We acknowledge the use of deletion strains …
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JGI Announces 2023 Community Science Program Awardees
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … nutrient cycling, and biogeochemistry. You can learn more about this year’s recipients on our Twitter. Samples were … and biofuels, biomaterials and bioproducts. Learn more about our proposals, including how to apply, here on our …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … author Avinash Sreedasyam, a HudsonAlpha senior scientist, about the project. The story is reposted here in modified … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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Adaptation strategies of giant viruses to low-temperature marine ecosystems
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