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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Multi-omics profiling of the cold tolerant Monoraphidium minutum 26B-AM in response to abiotic stress
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the whole soil profile. The goals of their FICUS proposal include assessing …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … the development of novel computational tools to identify virus sequences, the design of new experimental approaches to … 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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2025 NeLLi Symposium
… fees: Regular attendees  (LBNL and external): $400  Industry: $450  Students and postdocs (including LBNL students … microbial symbiosis.  This is a continuation of the previous NeLLi Symposia. In this 2025 Symposium, we will showcase … and other technological developments leveraging recent progress in AI/ML that will enable researchers to discover …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem … The Microbial Program focuses on using advanced sequencing technologies to explore …
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Ian Blaby
… the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory where he focused on functional genomics of phototrophs. Through this and …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing … genomic potential into practical applications, including sustainable biofuels, biomaterials, natural products, and … biodegradation and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast …
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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