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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
Learn more
Fishing for Novel Cellulose Degraders
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given … (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Computationally Classifying Fungal Lifestyles
Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant pathogens … and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. … higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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Ian Blaby
… the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, 672-680. 2014 …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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When “The Blob” Made It Hotter Under the Water
… began in late 2013, when a large patch of warm ocean water about a third the size of the United States began forming in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Synthesis
The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, and quality control Strain … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …
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Rex Malmstrom
… the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he developed a high … cell sorting and non-standard molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic … BONCAT-FACS.  Nature Comm 10(1) 1-10 Schulz, F. et al. 2018. Hidden diversity of soil giant viruses. Nature Comm . …
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Building Sphagnum Genomic Resources
… resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … other single plant genus. Peatlands accumulate partially decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high …
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